Recently, I looked at some of the biographies for characters from past MK games. I found the one for Rayden's biography from Mortal Kombat (1992) and saw something in common with his ending for Mortal Kombat Trilogy.
Both of them say he takes the form of a human to compete. If his designs in the MK games are what he looks like as a human, what would he actually look like in his real form?
Would he just be an entity composed of thunder and lightning? Or would he resemble more like his Elder God outfit from Mortal Kombat: Deadly Alliance?
Even in MK X, none of his variations are named Elder God so we can assume he doesn't become one in the new timeline especially after doing the Butterfly Effect with his amulet and future "About to be crushed with a hammer" Dark Rayden saying three words.